< PhD overview

CodeMapper: Semi-automatic coding of of medical case definitions using the UMLS

CodeMapper assists in the creation of code sets from case definitions, for several coding systems simultaneously while keeping a record of the complete mapping process. Its workflow is structured in three steps:

comap-overview.png

Application: https://euadr.erasmusmc.nl/CodeMapper (please ask me for credentials).

Code: https://github.com/mi-erasmusmc/comap

A presentation describes the concepts, and shows the user interface with a walk-through.

Publication

CodeMapper: semi-automatic coding of medical case definitions.
Benedikt Becker, Paul Avillach, Silvana Romio, Erik Mulligen, Daniel Weibel, Miriam Sturkenboom, Jan Kors.
Pharmacoepidemiology and drug safety, 2017 (link)


Last update: 2019-01-11